Publications

(*): Co-first authorship, (+): Co-second authorship

2024

  1. hest.jpeg
    Hest-1k: A dataset for spatial transcriptomics and histology image analysis
    Guillaume Jaume*, Paul Doucet*, Andrew H Song, Ming Y Lu, Cristina Almagro-Pérez, Sophia J Wagner, Anurag J Vaidya, Richard J Chen, and 3 more authors
    In The Thirty-eight Conference on Neural Information Processing Systems Datasets and Benchmarks Track , 2024
    HTML Github
  2. nature_gen2.png
    3D genomic mapping reveals multifocality of human pancreatic precancers
    Alicia M Braxton, Ashley L Kiemen, Mia P Grahn, André Forjaz, Jeeun Parksong, Jaanvi Mahesh Babu, Jiaying Lai, Lily Zheng, and 37 more authors
    Nature, 2024
    HTML

2023

  1. tissue_clearing_med.png
    Tissue clearing and 3D reconstruction of digitized, serially sectioned slides provide novel insights into pancreatic cancer
    Ashley L Kiemen, Alexander Ioannis Damanakis, Alicia M Braxton, Jin He, Daniel Laheru, Elliot K Fishman, Patrick Chames, Cristina Almagro-Pérez, and 3 more authors
    Med, 2023
    HTML
  2. intraparenchymal.png
    Intraparenchymal metastases as a cause for local recurrence of pancreatic cancer
    Ashley L Kiemen, YoungGeun Choi, Alicia M Braxton, Cristina Almagro-Pérez, Sarah Graham, Mia P Grahn, Neha Nanda, Nicholas Roberts, and 3 more authors
    Histopathology, 2023
    HTML